PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10040428
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 183aa    MW: 19576.9 Da    PI: 7.5801
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10040428genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.11.9e-083394560
                 CHHHCHHHHHHHHHHHHHHHHHHHHH......HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  5 krerrkqkNReAArrsRqRKkaeiee......LeekvkeLeaeNkaLkkeleelkkevaklk 60
                 ++ +r+ +NRe+ArrsR RK++++ +      L+  v++L +eN +    ++  +++  +l+
  Lus10040428 33 RKRKRMVSNRESARRSRMRKQKRMRKqkhlddLTAQVDQLRKENGQIVASISVTTQHFLSLD 94
                 578999************99998865122222666666666666666666666666555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-62581No hitNo description
SMARTSM003381.4E-112999IPR004827Basic-leucine zipper domain
PfamPF077167.9E-73178IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.41E-63392No hitNo description
CDDcd147026.33E-173490No hitNo description
PROSITE patternPS0003603651IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MASSSGTSSA TSSPVSNNSA GSDSDLQALM DERKRKRMVS NRESARRSRM RKQKRMRKQK  60
HLDDLTAQVD QLRKENGQIV ASISVTTQHF LSLDADNSVL RAQVGELGNR LDSLNEILQF  120
LTPAADAVGG CGGGGGFGYE YDMAGMMAEH HGGCFWSPVN SAVMNQAMSM ESAAAADVFL  180
VN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13459RKRMVSNRESARRSRMRKQKRMRKQK
24552RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002512945.11e-51PREDICTED: bZIP transcription factor 53
TrEMBLB9RH862e-51B9RH86_RICCO; Ocs element-binding factor, putative
STRINGGLYMA12G04440.12e-45(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.15e-35basic leucine-zipper 44